DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and gzma

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:256 Identity:78/256 - (30%)
Similarity:116/256 - (45%) Gaps:33/256 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCMRPYLKVRLGEHD 99
            :....|:...|:.|:||...|.|:|||: ||....||||:|...::||||||:....:|.||.|.
 Frog    25 IHINGNICMDIIDGREAASHSRPYMAYI-YSRTGSCGGTLIKQNWVLTAAHCVVNNSEVILGAHK 88

  Fly   100 ITRNPDCQGGSCSPPAEEFDIVLATKYKRFD-RFLANDIALLKLSRNIRFNVHIQPICLILNPAA 163
            :....:.|        :.|.:..|..:..|: :...:||.||::....:.|..:..:.|......
 Frog    89 VKSRENEQ--------QRFSVARAIPHPCFEWKKKIHDIQLLQIKGAAKLNKFVSVLKLPTTDMD 145

  Fly   164 APNVHEFQAFGWGQTETNHS--ANVLQTTVLTRYDNRHCRSV---LSMPITINQLCVGF-----Q 218
            ..........|||.|:.|..  ::||:...:|..|...|..:   ....|:.|.||.|.     :
 Frog   146 VKPGSSCSTAGWGVTKPNGKTPSDVLREVNVTVVDRGTCNKIYKKFKTEISTNMLCAGAPKKSDK 210

  Fly   219 GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKC---QSPGVYT-YVPNYIRWIRYV 275
            ..|.|.|||||||:....:.        |||||| .||   :.||:|| ....|::|||.|
 Frog   211 KYDACQGDSGGPLICGKEFS--------GIVSFG-KKCGDPKYPGIYTRLTARYLQWIRDV 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 74/242 (31%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 76/244 (31%)

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