DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30088 and tmprss3a

DIOPT Version :10

Sequence 1:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001429713.1 Gene:tmprss3a / 100000148 ZFINID:ZDB-GENE-070912-70 Length:543 Species:Danio rerio


Alignment Length:275 Identity:87/275 - (31%)
Similarity:130/275 - (47%) Gaps:61/275 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCM-----RPYL 91
            :||  .....:.|||.|..:.....|:...|::.:|..|||:||:||:|||||||:     ..|.
Zfish   287 ACG--SRPKFSARIVGGNLSAEGQFPWQVSLHFQNEHLCGGSIITSRWILTAAHCVYGIAYPMYW 349

  Fly    92 KVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPIC 156
            .|..|..::..|      :....|.| .|:..::|:  .:.|.:||||:||::.:.||..::|||
Zfish   350 MVYAGLTELPLN------AVKAFAVE-KIIYHSRYR--PKGLDHDIALMKLAQPLTFNGMVEPIC 405

  Fly   157 LILNPAAAPNVHE-FQ------AFGWGQTETNHSANVLQTTVLTRYDNRHCRSV-------LSMP 207
            |       ||..| |:      ..|||.||....|:|.|          ||.||       .|.|
Zfish   406 L-------PNFGEQFEDGKMCWISGWGATEDGGDASVSQ----------HCASVPLISNKACSQP 453

  Fly   208 ------ITINQLCVGF--QGSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQ--SPGVY 262
                  :|...:|.|:  .|:|:|.|||||||..:.:  .:|:.  :|..|:|....:  .||||
Zfish   454 EVYQGYLTAGMICAGYLDGGTDSCQGDSGGPLACEDS--SIWKL--VGATSWGQGCAEKNKPGVY 514

  Fly   263 TYVPNYIRWIRYVMQ 277
            |.:...:.||...|:
Zfish   515 TRITQSLTWIHLQME 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 82/256 (32%)
tmprss3aNP_001429713.1 None

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