DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30087 and Prss52

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001419997.1 Gene:Prss52 / 683422 RGDID:1586868 Length:312 Species:Rattus norvegicus


Alignment Length:264 Identity:79/264 - (29%)
Similarity:123/264 - (46%) Gaps:39/264 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CGVTYESQTAMR-----VVNGKEAVIRSAPFMVYVTNNSLTHCGGSILNSRYILTAAHCV----F 85
            ||....::..::     ::.||.|.|...|:.|.:.|:....|||||||..::|:|:||.    .
  Rat    29 CGQGLSTRPLLQENVSAIMGGKPANISEVPWHVGIMNHGTHLCGGSILNEWWVLSASHCFDQINN 93

  Fly    86 PNLRLRLGEHNIRTDPDCQGSNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFNVHI 150
            .||.:|.|..::.|.        :.:.|:  :.|.|.|..::.....||||||.|...:|.:::.
  Rat    94 ANLEIRHGRDDLSTK--------NVKHEK--VDKLILHPKFDDWLLDNDIALLLLKSPLNLSING 148

  Fly   151 QPICILLNPASAPSVATYQ---TFGWGETKKNGFPHLLQTAELRAYDAAYCSRSFHAY----MNG 208
            .|||    .:....:..::   ..|||.|..:|..  :||.:|:..........:..|    :..
  Rat   149 IPIC----TSELSDLRIWKNCWVTGWGITNVSGVK--VQTTKLQKVQVDLFRWDWCGYVLPLLTK 207

  Fly   209 NQICAGHEE--RDTCAGDSGGPLVTRVDFDGVKRYLQLGIVSYGPTDC---QSPGVYTYVPNYIN 268
            |.:|||..:  .|.|.|||||.||.... ..:..:.|:||||:| ..|   ..|||||.|..|:.
  Rat   208 NMLCAGTPDGGMDACQGDSGGALVCNKK-RNINTWYQVGIVSWG-VGCGKKNLPGVYTKVSPYLK 270

  Fly   269 WIRR 272
            |||:
  Rat   271 WIRK 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 76/245 (31%)
Prss52NP_001419997.1 Tryp_SPc 46..275 CDD:238113 77/247 (31%)

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