DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30087 and Hgfac

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_445772.1 Gene:Hgfac / 58947 RGDID:70909 Length:653 Species:Rattus norvegicus


Alignment Length:268 Identity:81/268 - (30%)
Similarity:137/268 - (51%) Gaps:43/268 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PLCGVTYESQTAM--RVVNGKEAVIRSAPFM--VYVTNNSLTHCGGSILNSRYILTAAHCVF--- 85
            |.||..::.:|.:  |::.|..::..|.|::  :|:.|.   .|.||::::.::::||||..   
  Rat   390 PTCGKRHKKRTFLRPRIIGGSSSLPGSHPWLAAIYIGNG---FCAGSLVHTCWVVSAAHCFSSSP 451

  Fly    86 --PNLRLRLGEH--NIRTDPDCQGSNCSPRSEEYGIMKAITHRFYNAAN-HVNDIALLKL----N 141
              .::.:.||:|  |..||.          ::.:.|.|.:.:..|:..| :.:|:.|::|    .
  Rat   452 PRDSITVVLGQHFFNRTTDV----------TQTFAIEKYVPYTLYSVFNPNDHDLVLIRLKKKGE 506

  Fly   142 RSINFNVHIQPICILLNPASAPSVATYQTFGWGETKKN--GFPHLLQTAELRAYDAAYCS--RSF 202
            |....:..:||||:....:|.|:....|..|||...:|  |:.:.|..|.:.......||  ..:
  Rat   507 RCAVRSQFVQPICLPEAGSSFPTGHKCQIAGWGHMDENVSGYSNSLLEALVPLVADHKCSSPEVY 571

  Fly   203 HAYMNGNQICAGHEE--RDTCAGDSGGPLVTRVDFDGVKRYLQLGIVSYGPTDC---QSPGVYTY 262
            .|.::.|.:|||:.:  .|.|.||||||||  .:.:|| .|| .||:|:| ..|   ..|||||.
  Rat   572 GADISPNMLCAGYFDCKSDACQGDSGGPLV--CEKNGV-AYL-YGIISWG-DGCGRLNKPGVYTR 631

  Fly   263 VPNYINWI 270
            |.||::||
  Rat   632 VSNYVDWI 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 76/252 (30%)
HgfacNP_445772.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF 242..274 CDD:394967
Kringle 283..364 CDD:395005
Tryp_SPc 406..641 CDD:238113 76/252 (30%)
Blue background indicates that the domain is not in the aligned region.

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