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Protein Alignment CG30087 and TMPRSS4

DIOPT Version :10

Sequence 1:	NP_725489.2	Gene:	CG30087 / 246446	FlyBaseID:	FBgn0050087	Length:	277	Species:	Drosophila melanogaster
Sequence 2:	XP_005271670.1	Gene:	TMPRSS4 / 56649	HGNCID:	11878	Length:	494	Species:	Homo sapiens

Alignment Length:	260	Identity:	88/260 - (33%)
Similarity:	127/260 - (48%)	Gaps:	45/260 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 CGVTYESQTAMRVVNGKEAVIRSAPFMVYVTNNSLTHCGGSILNSRYILTAAHC------VFPNL 88
            ||   :|....|||..:||.:.|.|:.|.:..:....||||||:..::||||||      || |.
Human   196 CG---KSLKTPRVVGVEEASVDSWPWQVSIQYDKQHVCGGSILDPHWVLTAAHCFRKHTDVF-NW 256

  Fly    89 RLRLGEHNIRTDPDCQGSNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFNVHIQPI 153
            ::|.|...:.:.|            ...:.|.|...|.......|||||:||...:.|:..::||
Human   257 KVRAGSDKLGSFP------------SLAVAKIIIIEFNPMYPKDNDIALMKLQFPLTFSGTVRPI 309

  Fly   154 CI-----LLNPASAPSVATYQTFGWGETKKNG--FPHLLQTAELRAYDAAYCSR--SFHAYMNGN 209
            |:     .|.||:...:     .|||.||:||  ...:|..|.::..|:..|:.  ::...:...
Human   310 CLPFFDEELTPATPLWI-----IGWGFTKQNGGKMSDILLQASVQVIDSTRCNADDAYQGEVTEK 369

  Fly   210 QICAGHEER--DTCAGDSGGPLVTRVDFDGVKRYLQLGIVS--YGPTDCQSPGVYTYVPNYINWI 270
            .:|||..|.  |||.|||||||:.:.|     ::..:||||  ||.....:|||||.|..|:|||
Human   370 MMCAGIPEGGVDTCQGDSGGPLMYQSD-----QWHVVGIVSWGYGCGGPSTPGVYTKVSAYLNWI 429

Fly 271 270
Human 430 429

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.