DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30087 and cfd

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:240 Identity:71/240 - (29%)
Similarity:119/240 - (49%) Gaps:28/240 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VVNGKEAVIRSAPFMVYVTNNSLTHCGGSILNSRYILTAAHCV----FPNLRLRLGEHNIRTDPD 102
            :..|:||...|.|:|..|..|....|||.:::|:::::||||.    ...:::.||.|::....|
Zfish    21 ITGGQEAKAHSRPYMASVQWNGKHECGGFLISSQWVMSAAHCFQDGRTSGVKVVLGAHSLSGAED 85

  Fly   103 CQGSNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFNVHIQPICILLNPASAP-SVA 166
            .:.:.   .:|.|      .|..::.:|:.|||||:||::.:..:..::|:....:..:.| ..|
Zfish    86 TKQTF---DAEVY------NHPDFSISNYDNDIALIKLDKPVTQSDAVKPVKFQRDETADPKEAA 141

  Fly   167 TYQTFGWGE-TKKNGFPHLLQTAELRAYDAAYCSRS--FHAYMNGNQICAGHEERDTCAGDSGGP 228
            ..:|.|||. ....|.|..|....:...:...|.|:  :......|.:||..:.:|||.||||||
Zfish   142 VVETAGWGSLNNMGGRPDKLHELSIPVMERWRCGRADFYGEKFTSNMLCAADKRKDTCDGDSGGP 206

  Fly   229 LVTRVDFDGVKRYLQLGIVSYGPTDCQS---PGVYTYVPNYINWI 270
            |:.|    |:    .:||.|.|...|.|   ||:||.:.:|.:||
Zfish   207 LLYR----GI----VVGITSNGGKKCGSSRKPGLYTIISHYASWI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 71/240 (30%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 71/240 (30%)

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