DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30087 and Cfd

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:255 Identity:72/255 - (28%)
Similarity:123/255 - (48%) Gaps:37/255 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SQTAMRVVNGKEAVIRSAPFMVYVTNNSLTHCGGSILNSRYILTAAHCV-----FPNLRLRLGEH 95
            :|...|::.|:||:..:.|:|..|..|....|||::::.:::|:||||:     ...:::.||.|
  Rat    20 AQPRGRILGGQEAMAHARPYMASVQVNGTHVCGGTLVDEQWVLSAAHCMDGVTKDEVVQVLLGAH 84

  Fly    96 NIRTDPDCQGSNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFNVHIQPICIL---- 156
            ::        |:..|....|.:...:.|......:..:|:.|.||:.:.:...|::|:.:.    
  Rat    85 SL--------SSPEPYKHLYDVQSVVLHPGSRPDSVEDDLMLFKLSHNASLGPHVRPLPLQREDR 141

  Fly   157 -LNPASAPSVATYQTFGWGETKKNG-FPHLLQTAELRAYDAAYCS-RSFH-AYMNGNQICAGHEE 217
             :.|.:...||     |||.....| .|.:||...:...|...|: |::| ..:..|.:||....
  Rat   142 EVKPGTLCDVA-----GWGVVTHAGRRPDVLQQLTVSIMDRNTCNLRTYHDGAITKNMMCAESNR 201

  Fly   218 RDTCAGDSGGPLVTRVDFDGVKRYLQLGIVSYGPTDC---QSPGVYTYVPNYINWIRRAM 274
            ||||.||||||||..   |.|:     .:|::|...|   :.|||:|.|..|:.||...:
  Rat   202 RDTCRGDSGGPLVCG---DAVE-----AVVTWGSRVCGNRRKPGVFTRVATYVPWIENVL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 70/245 (29%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 70/246 (28%)
Self-inhibitor loop. /evidence=ECO:0000250|UniProtKB:P00746 224..228 1/3 (33%)

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