DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30087 and grass

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:269 Identity:102/269 - (37%)
Similarity:143/269 - (53%) Gaps:25/269 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CGVTYESQTAMRVVNGKEAVIRSAPFMVYVT----NNSLTHCGGSILNSRYILTAAHCV--FPN- 87
            || .:.||   ||.||.|..:.|.|:|..:.    ..|...|||::::.||||||||||  ..| 
  Fly   111 CG-NFLSQ---RVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQND 171

  Fly    88 -LRLRLGEHNIRTDPDC--QG--SNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFN 147
             ..:|||||.|.|:.||  ||  ..|:|.....||.|.:.|..|:|.:.::||||||||||:.|.
  Fly   172 LYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQ 236

  Fly   148 VHIQPICILLN---PASAPSVATYQTFGWGETKKNGFPHLLQTAELRAYDAAYCSRSFHAYMNGN 209
            .||:|||:.:.   ...|..::||...|||.|:......:|..|.:.....:.||:::...:..:
  Fly   237 KHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRAVPLS 301

  Fly   210 QICAGHEE-RDTCAGDSGGPLVTRVDFDG--VKRYLQLGIVSYGPTDC---QSPGVYTYVPNYIN 268
            |:|.|..: :|:|.|||||||.....:.|  ..:.::.||||.|...|   ..||:||.|..|:.
  Fly   302 QLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQ 366

  Fly   269 WIRRAMLIN 277
            ||...|..|
  Fly   367 WITDTMASN 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 95/250 (38%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 94/249 (38%)
Blue background indicates that the domain is not in the aligned region.

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