DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30087 and CG4613

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_648707.2 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster


Alignment Length:265 Identity:81/265 - (30%)
Similarity:123/265 - (46%) Gaps:55/265 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CGVTYESQTAMRVVNGKEAVIRSAPFMVYVTNNSLTHCGGSILNSRYILTAAHCVFPNLRLRLGE 94
            |||    ....|:|.|.:......|::..:...:...|||:::|.||:|||||||          
  Fly   129 CGV----PNVNRIVGGTQVRTNKYPWIAQIIRGTFLFCGGTLINDRYVLTAAHCV---------- 179

  Fly    95 HNIRTDPDCQGSN-----CSPRSEEYGIMKAI----THRFYNAANHVNDIALLKLNRSINFNVHI 150
            |.:    |.:|.:     ....|...|:.:::    .|..|:..:.|:|||||:|::.|      
  Fly   180 HGM----DMRGVSVRLLQLDRSSTHLGVTRSVAFAHAHVGYDPVSLVHDIALLRLDQPI------ 234

  Fly   151 QPICILLNPASAPSVATYQTF--------GWGETKKNG-FPHLLQTAELRAYDAAYC-SRSFHAY 205
             |:...:.||..|| ...|.|        |||.:::.| ...:||...:.....|.| :.|:.:.
  Fly   235 -PLVDTMRPACLPS-NWLQNFDFQKAIVAGWGLSQEGGSTSSVLQEVVVPIITNAQCRATSYRSM 297

  Fly   206 MNGNQICAGHEE---RDTCAGDSGGPLVTRVDFDGVKRYLQLGIVS--YGPTDCQSPGVYTYVPN 265
            :....:|||:.:   ||.|.|||||||:.|   |.:.|.  .|:||  ||.....:|||||.|..
  Fly   298 IVDTMMCAGYVKTGGRDACQGDSGGPLIVR---DRIFRL--AGVVSFGYGCAKPDAPGVYTRVSR 357

  Fly   266 YINWI 270
            |:.||
  Fly   358 YLEWI 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 77/253 (30%)
CG4613NP_648707.2 Tryp_SPc 136..362 CDD:214473 76/252 (30%)

Return to query results.
Submit another query.