DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30087 and Ser8

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster


Alignment Length:265 Identity:83/265 - (31%)
Similarity:122/265 - (46%) Gaps:59/265 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ESQTAM---RVVNGKEAVIRSAPFMVYVTNNSLTHCGGSILNSRYILTAAHCV-----FPNLRLR 91
            |.||:.   |:|.|..:.|...|:.|.:..:....|||||:::..|:|||||:     ..|||:|
  Fly    25 EPQTSSLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIR 89

  Fly    92 LGEHNIRTDPDCQGSNCSPRSEEYG-------IMKAITHRFYNAANHVNDIALLKLNRSINFNVH 149
            .|. |.||               ||       .:||  |..||:.:.:|||.:::|...:.|...
  Fly    90 AGS-NKRT---------------YGGVLVEVAAIKA--HEAYNSNSKINDIGVVRLKTKLTFGST 136

  Fly   150 IQPICIL-LNPA--SAPSVATYQTFGWGETKKNGFPH--LLQTAELRAYDAAYCSRSFHAY---M 206
            |:.|.:. ..||  ||.|::     |||:|..:| |.  .|...:.|....:.|..|.:.|   :
  Fly   137 IKAITMASATPAHGSAASIS-----GWGKTSTDG-PSSATLLFVDTRIVGRSQCGSSTYGYGSFI 195

  Fly   207 NGNQICAGHEERDTCAGDSGGPLVTRVDFDGVKRYLQLGIVSYGPTDC---QSPGVYTYVPNYIN 268
            ....|||....:|.|.||||||||:....        :|:||:| .||   ..||||..:....:
  Fly   196 KATMICAAATNKDACQGDSGGPLVSGGQL--------VGVVSWG-RDCAVANYPGVYANIAELRD 251

  Fly   269 WIRRA 273
            |:.:|
  Fly   252 WVLQA 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 78/252 (31%)
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 77/250 (31%)

Return to query results.
Submit another query.