DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30087 and Tmprss9

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001382445.1 Gene:Tmprss9 / 314636 RGDID:1309581 Length:1095 Species:Rattus norvegicus


Alignment Length:260 Identity:78/260 - (30%)
Similarity:119/260 - (45%) Gaps:38/260 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CGVTYESQTAMRVVNGKEAVIRSAPFMVYVTNNSLTHCGGSILNSRYILTAAHCVFPNLRLRLGE 94
            ||.....::|.|:|.|.||.....|:.|.:..|....||.:|:.:|::::||||           
  Rat   227 CGWQPAWRSAGRIVGGAEAAPGEFPWQVSLRENHEHFCGATIIGARWLVSAAHC----------- 280

  Fly    95 HNIRTDP----------DCQGSNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFNVH 149
            .|...||          ...||..|  :....:::...|..|||.....|:|:|:|.|.:.|..:
  Rat   281 FNEFQDPAQWAAQAGSVHLSGSEAS--AVRARVLRIAKHPAYNADTADFDVAVLELARPLPFGRY 343

  Fly   150 IQPICILLNPASA---PSVATYQTFGWGETKKNGF--PHLLQTAELRAYDAAYCSRSFHAYMNGN 209
            :||.|:   ||:.   |........|||..|::..  |.:||.|.:...|...||..:...:...
  Rat   344 VQPACL---PAATHVFPPRKKCLISGWGYLKEDFLVKPEVLQKATVELLDQNLCSSLYGHSLTDR 405

  Fly   210 QICAGHEER--DTCAGDSGGPLVTRVDFDGVKRYLQLGIVSY--GPTDCQSPGVYTYVPNYINWI 270
            .:|||:.:.  |:|.||||||||..   :...|:...|:||:  |..:.:.|||||.|....:||
  Rat   406 MVCAGYLDGKVDSCQGDSGGPLVCE---EPSGRFFLAGVVSWGIGCAEARRPGVYTRVTRLRDWI 467

  Fly   271  270
              Rat   468  467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 74/248 (30%)
Tmprss9NP_001382445.1 SEA 68..148 CDD:460188
LDLa 190..225 CDD:238060
Tryp_SPc 238..467 CDD:214473 73/247 (30%)
PHA03247 <463..539 CDD:223021 2/5 (40%)
Tryp_SPc 540..767 CDD:238113
Tryp_SPc 864..1089 CDD:238113
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.