DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30087 and Mcpt1

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_742041.1 Gene:Mcpt1 / 29266 RGDID:621058 Length:247 Species:Rattus norvegicus


Alignment Length:244 Identity:75/244 - (30%)
Similarity:115/244 - (47%) Gaps:34/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 AMRVVNGKEAVIRSAPFMVY---VTNNSL-THCGGSILNSRYILTAAHCVFPNLRLRLGEHNIRT 99
            |..::.|.|::..|.|:|.:   ||...| ..|||.:::.:::||||||....:.:.||.|::|.
  Rat    18 AEEIIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGREITVILGAHDVRK 82

  Fly   100 DPDCQGSNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFNVHIQPICILLNPASAPS 164
            ....|        ::..:.|.|.|..||:..:::||.||||.:.:.....:..:     |..:||
  Rat    83 RESTQ--------QKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVV-----PLPSPS 134

  Fly   165 -----VATYQTFGWGET-KKNGFPHLLQTAELRAYDAAYCSRSFHAYMNGNQICAGHEE--RDTC 221
                 .|.....|||:| .::...:.|:..|||..|...|. .:..|....|:|.|...  |...
  Rat   135 DFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACV-DYRYYEYKFQVCVGSPTTLRAAF 198

  Fly   222 AGDSGGPLVTRVDFDGVKRYLQLGIVSYGPTDCQSPGVYTYVPNYINWI 270
            .|||||||:..    ||..    ||||||..|.:.|.::|.|..|:.||
  Rat   199 MGDSGGPLLCA----GVAH----GIVSYGHPDAKPPAIFTRVSTYVPWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 74/241 (31%)
Mcpt1NP_742041.1 Tryp_SPc 21..242 CDD:238113 74/241 (31%)

Return to query results.
Submit another query.