DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30087 and Prss34

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001099242.1 Gene:Prss34 / 287140 RGDID:1306667 Length:316 Species:Rattus norvegicus


Alignment Length:304 Identity:81/304 - (26%)
Similarity:137/304 - (45%) Gaps:75/304 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WFVIAICLIRQQRIVDAQFLN-PLCGVTY-----ESQTAMRVVNGKEAVIRSAPFMVYVT--NNS 63
            ||:               ||. |..|.|.     ..|..:.:|.|........|:.|.:.  |..
  Rat     7 WFL---------------FLTLPCLGSTMPLTPDSGQELVGIVGGCPVSASRFPWQVSLRFYNMK 56

  Fly    64 LTH----CGGSILNSRYILTAAHCV------FPNLRLRLGEHNIRTDPDCQGSNCSPRSEEYGIM 118
            |:.    ||||:::.:::|||||||      ....|:::|:..:..:           .:...:.
  Rat    57 LSKWEHICGGSLIHPQWVLTAAHCVELKEMEASCFRVQVGQLRLYEN-----------DQLMKVA 110

  Fly   119 KAITHRFYN---AANHVNDIALLKLNRSINFNVHIQPICILLNPASAPSVATYQTF---GWGETK 177
            |.|.|..::   :|....|||||||:.::..:..:.|:.:   ||::..:::.:|:   |||..:
  Rat   111 KIIRHPKFSEKLSAPGGADIALLKLDSTVVLSERVHPVSL---PAASQRISSKKTWWVAGWGVIE 172

  Fly   178 -KNGFP---HLLQTAELRAYDAAYCSRSFHAY---------MNGNQICAGHEERDTCAGDSGGPL 229
             ....|   ||.:.| :.....:.|.:.:..|         :..:.:|||.|.||:|..||||||
  Rat   173 GHRPLPPPCHLREVA-VPIVGNSDCEQKYRTYSSLDRTTKIIKDDMLCAGMEGRDSCQADSGGPL 236

  Fly   230 VTRVDFDGVKRYLQLGIVSYGPTDC---QSPGVYTYVPNYINWI 270
            |.|.:..    ::|:|:||:| ..|   ..|||||.|.:|::||
  Rat   237 VCRWNCS----WVQVGVVSWG-IGCGLPDFPGVYTRVMSYLSWI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 73/263 (28%)
Prss34NP_001099242.1 Tryp_SPc 33..276 CDD:238113 73/263 (28%)

Return to query results.
Submit another query.