DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30087 and Gzmf

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_703196.2 Gene:Gzmf / 266704 RGDID:628603 Length:248 Species:Rattus norvegicus


Alignment Length:254 Identity:81/254 - (31%)
Similarity:119/254 - (46%) Gaps:44/254 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 AMRVVNGKEAVIRSAPFMVYVT------NNSLTHCGGSILNSRYILTAAHCVFPNLRLRLGEHNI 97
            |..::.|.|....|.|:|.:|.      |.|:  |||.::...::||||||...::::.||.||:
  Rat    18 AEEIIGGHEVKPHSRPYMAHVKFVKVDGNRSV--CGGFLVQDYFVLTAAHCTGRSMKVILGAHNL 80

  Fly    98 RTDPDCQGSNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFNVHIQPICI-----LL 157
            ......|        :...:.:||.|..||..:|:|||.||||.........::|:.:     ::
  Rat    81 HVQEKTQ--------QIIPVKRAIPHPAYNREDHINDIMLLKLESKAKKTRAVRPLNLPRPNDMV 137

  Fly   158 NPASAPSVATYQTFGWGE-----TKKNGFPHLLQTAELRAYDAAYCSRSFHAYMNGNQICAGHEE 217
            .|.....||     |||:     ||:..   .||.|:|...:...|.:.||.|....:||||..:
  Rat   138 KPGDVCRVA-----GWGQMSVDVTKRTS---RLQEAKLIIQEDKECKKLFHHYSETTEICAGDPK 194

  Fly   218 RDTCA--GDSGGPLVTRVDFDGVKRYLQLGIVSYGPTDCQSPGVYTYVPNYINWIRRAM 274
            :...|  ||||||||..     .:.|   |:||||.....|.||:|.|..::.||.|.|
  Rat   195 KIQAAYKGDSGGPLVCE-----NRAY---GVVSYGKNGTISSGVFTKVVYFLPWISRNM 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 78/247 (32%)
GzmfNP_703196.2 Tryp_SPc 21..244 CDD:238113 78/248 (31%)

Return to query results.
Submit another query.