DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30087 and St14

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:254 Identity:79/254 - (31%)
Similarity:121/254 - (47%) Gaps:19/254 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CGVTYESQTAMRVVNGKEAVIRSAPFMVYVTNNSLTH-CGGSILNSRYILTAAHCVFPNLRLRLG 93
            ||:...::.| |||.|..|.....|:.|.:......| ||.|:::..::::||||.......:..
  Rat   604 CGLRSFTKQA-RVVGGTNADEGEWPWQVSLHALGQGHLCGASLISPDWLVSAAHCFQDETIFKYS 667

  Fly    94 EHNIRT------DPDCQGSNCSPRSEEYGIMKAITHRFYNAANHVNDIALLKLNRSINFNVHIQP 152
            :|.:.|      |   |....:...:|:.:.:.|||..:|......|||||:|.:...::..::|
  Rat   668 DHTMWTAFLGLLD---QSKRSASGVQEHKLKRIITHPSFNDFTFDYDIALLELEKPAEYSTVVRP 729

  Fly   153 ICILLNPASAPSVATYQTFGWGETKKNGFPHL-LQTAELRAYDAAYCSRSFHAYMNGNQICAGHE 216
            ||:..|....|:.......|||.||:.|...| ||..|:|..:...|.......:....:|.|..
  Rat   730 ICLPDNTHVFPAGKAIWVTGWGHTKEGGTGALILQKGEIRVINQTTCEELLPQQITPRMMCVGFL 794

  Fly   217 ER--DTCAGDSGGPLVTRVDFDGVKRYLQLGIVSYGPTDCQ--SPGVYTYVPNYINWIR 271
            ..  |:|.||||||| :.|:.||  |..|.|:||:|....|  .|||||.:|...:||:
  Rat   795 SGGVDSCQGDSGGPL-SSVEKDG--RIFQAGVVSWGEGCAQRNKPGVYTRIPEVRDWIK 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 75/242 (31%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 75/242 (31%)
Blue background indicates that the domain is not in the aligned region.

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