DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30087 and ovch2

DIOPT Version :10

Sequence 1:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster
Sequence 2:XP_031756362.1 Gene:ovch2 / 100496902 XenbaseID:XB-GENE-955935 Length:1023 Species:Xenopus tropicalis


Alignment Length:264 Identity:71/264 - (26%)
Similarity:127/264 - (48%) Gaps:52/264 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVVNGKEAVIRSAPFMVYVTNNSLTHCGGSILNSRYILTAAHCVFPN-----LRLRLGEHN--IR 98
            |:|.|:|:.....|:.|.:..|....|||.:::.|::|||:||:...     :|:..||::  |:
 Frog    63 RIVGGRESKKGQHPWTVSLKRNGKHFCGGILVSRRHVLTASHCLLDRNVKSYIRVFFGEYDQTIK 127

  Fly    99 TDPDCQGSNCSPRSEEYGIMKAITHRFYNAANHVN-DIALLKLNRSINFNVHIQPICILLNPASA 162
            .|.:          :.:.:::...|..:|....:| |:|:|.|:.::.|:.:|||.| :.||...
 Frog   128 EDTE----------QTFKVIEIFKHPDFNYTQPMNYDVAVLVLDGAVTFDDNIQPAC-MPNPDDV 181

  Fly   163 --PSVATYQTFGWGETKKNG-FPHLLQTAELRAYDAAYC----SRSFHAYMNGNQICAGHEE--R 218
              |..... |.|||...:|| .|.:||...|...:.:.|    :....|.::...:|||..|  :
 Frog   182 FEPGDLCV-TLGWGHLTENGILPGVLQEVLLPLVNLSICLDVMATLKGAVVSSKIVCAGFPEGGK 245

  Fly   219 DTCAGDSGGPLVTRVDFDGVKR---YLQLGIVSYG-------------PTDCQ-SPGVYTYVPNY 266
            |.|.|||||||:.:      :|   ::..|:.|:|             |.:.: |||::|.:...
 Frog   246 DACQGDSGGPLLCQ------RRHGTWVLHGLTSWGMGCGRSWKNNMFLPANRKGSPGIFTDIQKL 304

  Fly   267 INWI 270
            :.|:
 Frog   305 LGWV 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 70/263 (27%)
ovch2XP_031756362.1 Tryp_SPc 64..309 CDD:238113 70/263 (27%)
CUB 330..436 CDD:238001
CUB 447..558 CDD:238001
Tryp_SPc 606..832 CDD:238113
CUB 888..1000 CDD:238001
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.