DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30083 and Tpsab1

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:281 Identity:75/281 - (26%)
Similarity:123/281 - (43%) Gaps:39/281 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IFKIILLWPGAMSQFLE--PNCGYPDISPKIMHGQNAENGTNPWMAYIFKYNDKEVAELVCGGTL 68
            :.|::||....:|..:.  |:...|  ...|:.||.|.....||...: :.||...... |||:|
  Rat    38 MLKLLLLTLPLLSSLVHAAPSLAMP--REGIVGGQEASGNKWPWQVSL-RVNDTYWMHF-CGGSL 98

  Fly    69 IHKQFVLSAAHCI---KRD-QILAVRLGE---HSSSRYFAVTKAFRNKYFTTGSYSNDIGILRIQ 126
            ||.|:||:||||:   |.| ..|.|:|.:   :.......|::...:..|.......||.:|::.
  Rat    99 IHPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYYHDHLLTVSQIISHPDFYIAQDGADIALLKLT 163

  Fly   127 PIVKFNAVIRPICIITDPTKVPNVKTFKAAGWGKTENET-------FSKVLKTVELNE------- 177
            ..|...:.:..:.:.......|:.......|||...|:.       ..:|...:..|.       
  Rat   164 NPVNITSNVHTVSLPPASETFPSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLCDLKYH 228

  Fly   178 --LNASECYNMLWVNVTESQICAGHPDGDTCAGDSGGPLIHPVYMDGSLRYVQLGIISFGSSLC- 239
              ||..:..::    |.:..:|||:...|:|.|||||||:..|    ...::|.|::|:|.... 
  Rat   229 KGLNTGDNVHI----VRDDMLCAGNEGHDSCQGDSGGPLVCKV----EDTWLQAGVVSWGEGCAQ 285

  Fly   240 -NSPGVYTRLSSFIDWILMVV 259
             |.||:|||::.::|||...|
  Rat   286 PNRPGIYTRVTYYLDWIYRYV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 66/245 (27%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:238113 66/245 (27%)

Return to query results.
Submit another query.