DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30083 and Tmprss11f

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:XP_063129928.1 Gene:Tmprss11f / 498345 RGDID:1560675 Length:489 Species:Rattus norvegicus


Alignment Length:280 Identity:77/280 - (27%)
Similarity:127/280 - (45%) Gaps:66/280 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MSQFLEPNCGY-----------PDISPKIMHG-QNAENGTNPWMAYIFKYNDKEVAELV-----C 64
            |...|...||.           ...:.:|:.| :.|..|..||.|.:         :|:     |
  Rat   229 MRNLLNSRCGIRMSSSNIPLPASSTTERIVQGRETAMEGEWPWQASL---------QLIGAGHQC 284

  Fly    65 GGTLIHKQFVLSAAHCIKRDQILAVRLGEHSSSRYFA--------------VTKAFRNKYFTTGS 115
            |.|||...::|:||||..:::         ..|::.|              |.:...::.:...|
  Rat   285 GATLISNTWLLTAAHCFWKNR---------DPSKWIATFGTTITPPLVKRSVGRIIIHEEYHRDS 340

  Fly   116 YSNDIGILRIQPIVKFNAVIRPICIITDPTKVPNVKTFKAAGWGK------TENETFSKVLKTVE 174
            ..|||.:.::...|:|:.|::.:|:.....|:|...:....|:|.      |:|:.....::|:.
  Rat   341 NENDIALAQLTSRVEFSNVVQRVCLPDSSMKLPPKTSVFVTGFGSIVDDGPTQNKLRQARVETIG 405

  Fly   175 LNELNASECYNMLWVNVTESQICAGHPDG--DTCAGDSGGPLIHPVYMDGSLRYVQLGIISFGSS 237
            .:..|..:.|:.|   :|...:|||..:|  |.|.|||||||   ||.:..:.|: :||:|:|.|
  Rat   406 SDVCNQKDVYDGL---ITPGMLCAGFMEGKVDACKGDSGGPL---VYDNRDIWYI-VGIVSWGQS 463

  Fly   238 --LCNSPGVYTRLSSFIDWI 255
              |.|.||||||:|.:.|||
  Rat   464 CALPNKPGVYTRVSKYRDWI 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 71/250 (28%)
Tmprss11fXP_063129928.1 None

Return to query results.
Submit another query.