DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30083 and grass

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:270 Identity:83/270 - (30%)
Similarity:128/270 - (47%) Gaps:33/270 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MSQFLEPN--CGYPDISPKIMHGQNAENGTNPWMAYIFKYNDKEVAELVCGGTLIHKQFVLSAAH 79
            ||.|.:.|  || ..:|.::.:|...:..:.|||| :.:|.....:..:|||.:|.::::|:|||
  Fly   101 MSLFKDENFDCG-NFLSQRVSNGYEVKLSSRPWMA-LLRYQQFGESRFLCGGAMISERYILTAAH 163

  Fly    80 CIK--RDQILAVRLGEHSSSR------------------YFAVTKAFRNKYFTTGSYSNDIGILR 124
            |:.  ::.:..:|||||..|.                  ...:.|...::.:......:||.:|:
  Fly   164 CVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLK 228

  Fly   125 IQPIVKFNAVIRPICI-ITD--PTKVPNVKTFKAAGWGKTENETFSKVLKTVELNELNASECYNM 186
            :...|.|...|:|||: |||  ..|...:.|:...|||.|||.:.|.||....:.....|.|...
  Fly   229 LNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQA 293

  Fly   187 LWVNVTESQICAGHPD-GDTCAGDSGGPLIHPVYMDGSL--RYVQLGIISFGSSLCNS---PGVY 245
            ....|..||:|.|..| .|:|.|||||||..|....|..  :.|:.||:|.|...|..   ||:|
  Fly   294 YRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLY 358

  Fly   246 TRLSSFIDWI 255
            |.:..::.||
  Fly   359 TNVGEYVQWI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 74/249 (30%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 76/249 (31%)
Blue background indicates that the domain is not in the aligned region.

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