DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30083 and CG17475

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_650600.2 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster


Alignment Length:211 Identity:61/211 - (28%)
Similarity:97/211 - (45%) Gaps:28/211 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 VCGGTLIHKQFVLSAAHCI--KRDQILAVRLG----EHSSSRYFAVTKAFRNKYFTTGSYSNDIG 121
            :|||.:|.::.||:||||:  .....|.|..|    |...:.|| |.:.:.:..:.:..|.|||.
  Fly    75 ICGGCIIDERHVLTAAHCVYGYNPTYLRVITGTVEYEKPDAVYF-VEEHWIHCNYNSPDYHNDIA 138

  Fly   122 ILRIQPIVKFNAVIRPICIITDPTKVPNVKTFKAAGWGKTE--NETFSKVLKTVELNELNASECY 184
            ::|:...:|||...:|..:.|.|  |.|.......|||.||  .:| ..:|:...|..:..|.|.
  Fly   139 LIRLNDTIKFNEYTQPAELPTAP--VANGTQLLLTGWGSTELWGDT-PDILQKAYLTHVVYSTCQ 200

  Fly   185 NMLWVNVTES----QICAGHPDGD-TCAGDSGGPLIHPVYMDGSLRYVQLGIISFG-SSLCNSPG 243
            .::  |...|    .||.....|. .|.|||||||.|    :|    |..|::::| ......|.
  Fly   201 EIM--NNDPSNGPCHICTLTTGGQGACHGDSGGPLTH----NG----VLYGLVNWGYPCALGVPD 255

  Fly   244 VYTRLSSFIDWILMVV 259
            .:..:..:::||..::
  Fly   256 SHANVYYYLEWIRSMI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 59/205 (29%)
CG17475NP_650600.2 Tryp_SPc 50..269 CDD:238113 61/207 (29%)

Return to query results.
Submit another query.