DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30083 and CG3088

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster


Alignment Length:241 Identity:60/241 - (24%)
Similarity:105/241 - (43%) Gaps:44/241 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IMHGQNAENGTNPW---MAYIFKYNDKEVAELVCGGTLIHKQFVLSAAHCIKRDQILAVRLGEHS 95
            |.:|..|..|..|:   ||:       ..:.:.|.||:|...::|::|.|:         .|...
  Fly    29 ITNGSPAYEGQAPYVVGMAF-------GQSNIWCSGTIIGDTWILTSAQCL---------TGSSG 77

  Fly    96 SSRYFAVTKAFRNKY--------FTTGSYSNDIGILRIQPIVKFNAVIRPICIITDPTKVPNVKT 152
            .:.||..|:..:.::        :.||  :..:.::|: |.|.|:..:..:.:.:...:....:.
  Fly    78 VTIYFGATRLSQAQFTVTVGTSEYVTG--NQHLALVRV-PRVGFSNRVNRVALPSLRNRSQRYEN 139

  Fly   153 FKA--AGWGKTENETFSK----VLKTVELNELNASECYNMLWVNVTESQI-CAGHPDG-DTCAGD 209
            :.|  .|||.|   |||.    .|:.|:|..::.:||...........|| |...|.| .||.||
  Fly   140 WWANVCGWGVT---TFSNGLTDALQCVDLQIMSNNECIAFYGSTTVSDQILCTRTPSGRSTCFGD 201

  Fly   210 SGGPLIHPVYMDGSLRYVQLGIISFGSSLCNSPGVYTRLSSFIDWI 255
            :|.|||  ...|.::..:...:.|.|.:| ..|..:.|::|.:|||
  Fly   202 AGSPLI--TKQDSTVVGISAFVASNGCTL-GLPAGFARITSALDWI 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 58/239 (24%)
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 58/239 (24%)

Return to query results.
Submit another query.