DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30083 and Tmprss4

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:260 Identity:78/260 - (30%)
Similarity:135/260 - (51%) Gaps:39/260 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NCGYPDISPKIMHGQNAENGTNPWMAYIFKYNDKEVAELVCGGTLIHKQFVLSAAHCIKRDQILA 88
            :||....:.:::.|..|...:.||...| :||.:.    ||||:::...::|:||||.::...::
  Rat   236 DCGKSLKTTRVVGGVEASADSWPWQVSI-QYNKQH----VCGGSILDHHWILTAAHCFRKYLDVS 295

  Fly    89 ---VRLGEH--SSSRYFAVTKAFRNKYFTTGSYSNDIGILRIQPIVKFNAVIRPICI-ITDPTKV 147
               ||.|.:  .:|....|.|.|..:.........||.:::::..:.|:..:||||: .:|...:
  Rat   296 SWKVRAGSNKLGNSPSLPVAKIFIAEPNPLQPKEKDIALVKLKMPLTFSGSVRPICLPFSDEELI 360

  Fly   148 PNVKTFKAAGWGKTE------NETFSKV-LKTVELNELNASECYNMLWVNVTESQICAGHPDG-- 203
            |.:..: ..|||.||      ::|..:. ::.::....||.:.|.   ..||...:|||.|.|  
  Rat   361 PTMPVW-VIGWGFTEENGGKMSDTLLQASVQVIDSARCNAEDAYQ---GEVTAGMLCAGTPQGGK 421

  Fly   204 DTCAGDSGGPLIHPVYMDGSLRYVQLGIISFGSSLCNS---PGVYTRLSSFIDWILMVVDNYTVR 265
            |||.|||||||::  :.|   ::..:||:|:|.. |.|   |||||::::::|||      |.||
  Rat   422 DTCQGDSGGPLMY--HYD---KWQVVGIVSWGYG-CGSPSTPGVYTKVTAYLDWI------YNVR 474

  Fly   266  265
              Rat   475  474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 71/238 (30%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597 0/1 (0%)
Tryp_SPc 245..470 CDD:214473 71/239 (30%)
Blue background indicates that the domain is not in the aligned region.

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