DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30083 and 1810009J06Rikl

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:1810009J06Rikl / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:215 Identity:67/215 - (31%)
Similarity:110/215 - (51%) Gaps:34/215 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 CGGTLIHKQFVLSAAHCIKRDQILAVRLGEHS------SSRYFAVTKAFRNKYFTTGSYSNDIGI 122
            |||:||..|:|||||||.||.  |.||||||:      ..::....|..|:..:...:..|||.:
  Rat    49 CGGSLISDQWVLSAAHCYKRK--LQVRLGEHNIHVLEGGEQFIDAEKIIRHPEYNKDTLDNDIML 111

  Fly   123 LRIQPIVKFNAVIRPI-----CIITDPTKVPNVKTFKAAGWGKTEN--ETFSKVLKTVELNELNA 180
            ::::.....|:.:..:     |..||...:       .:|||.|.:  ..:..:|:.:|...|:|
  Rat   112 IKLKSPAVLNSQVSTVSLPRSCASTDAQCL-------VSGWGNTVSIGGKYPALLQCLEAPVLSA 169

  Fly   181 SECYNMLWVNVTESQICAGHPDG--DTCAGDSGGPLIHPVYMDGSLRYVQLGIISFGS--SLCNS 241
            |.|.......:|.:..|.|..:|  |:|.||||||::    .:|.::    ||:|:||  ::...
  Rat   170 SSCKKSYPGQITSNMFCLGFLEGGKDSCDGDSGGPVV----CNGEIQ----GIVSWGSVCAMRGK 226

  Fly   242 PGVYTRLSSFIDWILMVVDN 261
            |||||::.:::.||...:.|
  Rat   227 PGVYTKVCNYLSWIQETMAN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 64/207 (31%)
1810009J06RiklNP_775423.1 Tryp_SPc 24..243 CDD:238113 66/210 (31%)

Return to query results.
Submit another query.