DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30083 and Gzma

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:249 Identity:78/249 - (31%)
Similarity:121/249 - (48%) Gaps:49/249 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KIMHGQNAENGTNPWMAYIFKYNDKEVAELVCGGTLIHKQFVLSAAHCI--KRDQILAVRLGEHS 95
            :|:.|......:.|:|..:     |...:.||.|.||.|.:||:|||||  |:.:::   ||.||
  Rat    28 RIIGGDTVVPHSRPYMVLL-----KLKPDSVCAGALIAKNWVLTAAHCIPGKKSEVI---LGAHS 84

  Fly    96 -----SSRYFAVTKAFRNKYFTTGSYSNDIGILRIQPIVKFNAVIRPICIITDPTKVPNVK---T 152
                 ..:..:|.||:....|...::..|:.:||::.....|   :.:.|:..|.|..:||   .
  Rat    85 IKKEPEQQILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLN---KNVAILHLPKKGDDVKPGTR 146

  Fly   153 FKAAGWGKTENET-FSKVLKTVELNELNASEC-----YN---MLWVNVTESQICAGHPDG--DTC 206
            ...||||:..|:: .|..|:.|.:..::...|     ||   ::.:|:    ||||:..|  |:|
  Rat   147 CHVAGWGRFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGLNM----ICAGNLRGGKDSC 207

  Fly   207 AGDSGGPLIHPVYMDGSLRYVQLGIISFG-SSLC---NSPGVYTRLS-SFIDWI 255
            .|||||||:    .:|..|    ||.:|| ...|   ..||:||.|| ..:|||
  Rat   208 YGDSGGPLL----CEGIFR----GITAFGLEGTCGDPKGPGIYTLLSDKHLDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 76/246 (31%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 78/248 (31%)

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