DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30083 and Tmprss2

DIOPT Version :10

Sequence 1:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:262 Identity:74/262 - (28%)
Similarity:122/262 - (46%) Gaps:53/262 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CGYPDI--SPKIMHGQNAENGTNPWMAYIFKYNDKEVAEL-VCGGTLIHKQFVLSAAHCIKRDQI 86
            ||...:  ..:|:.|..|..|..||...:      .|..: ||||::|..:::::||||::... 
  Rat   243 CGVRSVRRQSRIVGGSTASPGDWPWQVSL------HVQGIHVCGGSIITPEWIVTAAHCVEEPL- 300

  Fly    87 LAVRLGEHSSSRYFA------------------VTKAFRNKYFTTGSYSNDIGILRIQPIVKFNA 133
                    ||.||:.                  |.|...:..:.:.:.:|||.::::|..:.||.
  Rat   301 --------SSPRYWTAFAGILKQSLMFYGSRHQVEKVISHPNYDSKTKNNDIALMKLQTPLAFND 357

  Fly   134 VIRPICIITDPTKVPNVKTFKAAGWGKT-ENETFSKVLKT-----VELNELNASECYNMLWVNVT 192
            |::|:|:......:...:....:|||.| |....|.||..     :|.::.|:...||.|   :|
  Rat   358 VVKPVCLPNPGMMLDLAQECWISGWGATYEKGKTSDVLNAAMVPLIEPSKCNSKYIYNNL---IT 419

  Fly   193 ESQICAGHPDG--DTCAGDSGGPLIHPVYMDGSLRYVQLGIISFGSSLCNS--PGVYTRLSSFID 253
            .:.||||...|  |:|.|||||||   |.:...:.:: :|..|:||....:  ||||..::.|.|
  Rat   420 PAMICAGFLQGSVDSCQGDSGGPL---VTLKNEIWWL-IGDTSWGSGCAKAYRPGVYGNVTVFTD 480

  Fly   254 WI 255
            ||
  Rat   481 WI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 70/249 (28%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 2/3 (67%)
Tryp_SPc 254..485 CDD:238113 72/251 (29%)
Blue background indicates that the domain is not in the aligned region.

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