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Protein Alignment CG30082 and Plg

DIOPT Version :10

Sequence 1:	NP_001188942.1	Gene:	CG30082 / 246443	FlyBaseID:	FBgn0050082	Length:	280	Species:	Drosophila melanogaster
Sequence 2:	NP_445943.1	Gene:	Plg / 85253	RGDID:	619893	Length:	812	Species:	Rattus norvegicus

Alignment Length:	282	Identity:	83/282 - (29%)
Similarity:	113/282 - (40%)	Gaps:	54/282 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 ASFAFLVCLTPKLRAQFIDP-NCGTTINLPPTNRIVGGRTADIGSNPWLAYLHKNSS--LVCTGT 68
            ||.:...|..|:     ::| .|        ..|:|||..|:..|.||...|....|  ..|.||
  Rat   561 ASLSSFECGKPQ-----VEPKKC--------PGRVVGGCVANPHSWPWQISLRTRFSGQHFCGGT 612

  Fly    69 LITKRFVLTAAHCLHSFHLLTVRLGEYDTSTRIDCTSEF---CIPTYEE----YSVENAYIHTFF 126
            ||:..:||||||||             :.|:|    .||   .:..:||    ..|:...:....
  Rat   613 LISPEWVLTAAHCL-------------EKSSR----PEFYKVILGAHEERILGSDVQQIAVTKLV 660

  Fly   127 GGRQDSRNDIGLLKLNGTVVYKLFIRPICLFRDPGQVPYSSTY-EAAGWGKIDLINTATVLQTVN 190
            ....|:  ||.||||:........:.|.|| ..|..|....|. ...|||:......|..|:...
  Rat   661 LEPNDA--DIALLKLSRPATITDNVIPACL-PSPNYVVADRTLCYITGWGETKGTPGAGRLKEAQ 722

  Fly   191 LIRLDQSDCERS--LRTSLSYGQFCAGQWRA--DTCSGDSGGPLSRKMSNGRITRTVQLGIVSYG 251
            |..::...|.|:  |...:...:.|||....  |:|.|||||||.....:..|.:    |:.|:|
  Rat   723 LPVIENKVCNRAEYLNNRVKSTELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQ----GVTSWG 783

  Fly   252 HYLCR--GPGVYTYVPSFTNWI 271
            ....|  .||||..|..:.|||
  Rat   784 LGCARPNKPGVYVRVSRYVNWI 805

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.