DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30082 and Prss52

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001419997.1 Gene:Prss52 / 683422 RGDID:1586868 Length:312 Species:Rattus norvegicus


Alignment Length:278 Identity:79/278 - (28%)
Similarity:113/278 - (40%) Gaps:68/278 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CGTTINLPP-----TNRIVGGRTADIGSNPWLAYLHKNSSLVCTGTLITKRFVLTAAHCLHSFH- 86
            ||..::..|     .:.|:||:.|:|...||...:..:.:.:|.|:::.:.:||:|:||....: 
  Rat    29 CGQGLSTRPLLQENVSAIMGGKPANISEVPWHVGIMNHGTHLCGGSILNEWWVLSASHCFDQINN 93

  Fly    87 -LLTVRLGEYDTSTRIDCTSEFCIPTYEEYSVENAYIHTFFGGRQDS---RNDIGLLKLNGTVVY 147
             .|.:|.|..|.||:          ..:...|:...:|..|    |.   .|||.||.|...:..
  Rat    94 ANLEIRHGRDDLSTK----------NVKHEKVDKLILHPKF----DDWLLDNDIALLLLKSPLNL 144

  Fly   148 KLFIRPICLFRDPGQVPYSSTYE-----------AAGWGKIDLINTATV-LQT-------VNLIR 193
            .:...|||            |.|           ..|||   :.|.:.| :||       |:|.|
  Rat   145 SINGIPIC------------TSELSDLRIWKNCWVTGWG---ITNVSGVKVQTTKLQKVQVDLFR 194

  Fly   194 LDQSDCERSLRTSLSYGQFCAG--QWRADTCSGDSGGPL-SRKMSNGRITRTVQLGIVSYGHYLC 255
            .|.......|   |:....|||  ....|.|.|||||.| ..|..|  |....|:||||:|....
  Rat   195 WDWCGYVLPL---LTKNMLCAGTPDGGMDACQGDSGGALVCNKKRN--INTWYQVGIVSWGVGCG 254

  Fly   256 RG--PGVYTYVPSFTNWI 271
            :.  |||||.|..:..||
  Rat   255 KKNLPGVYTKVSPYLKWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 76/261 (29%)
Prss52NP_001419997.1 Tryp_SPc 46..275 CDD:238113 76/261 (29%)

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