DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30082 and Cma2

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001019885.1 Gene:Cma2 / 545055 MGIID:88426 Length:246 Species:Mus musculus


Alignment Length:252 Identity:75/252 - (29%)
Similarity:115/252 - (45%) Gaps:53/252 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGGRTADIGSNPWLAYLH----KNSSLVCTGTLITKRFVLTAAHCLHSFHLLTVRLGEYDTSTR 100
            |:||..::..|.|::||::    |....:|.|.|||.:||:|||||  |...:||.||.::...|
Mouse    21 IIGGVESEPHSRPYMAYVNTFRRKGYVAICGGFLITPQFVMTAAHC--SGRRMTVTLGAHNVRKR 83

  Fly   101 IDCTSE------FCIPTYEEYSVENAYIHTFFGGRQDSRNDIGLLKL--NGTVVYKLFIRPICL- 156
             :||.:      :.:|  ..|:|.:.:            |||.||||  ...:...:.:.|:.. 
Mouse    84 -ECTQQKIKVEKYILP--PNYNVSSKF------------NDIVLLKLKKQANLTSAVDVVPLPAP 133

  Fly   157 --FRDPGQVPYSSTYEAAGWGKIDLINT-ATVLQTVNLIRLDQSDCE--RSLRTSLSYGQFCAGQ 216
              |..||.:.:     |||||:..|..: :..|:.|.|..:.:..|:  :..:.||   |.|.|.
Mouse   134 SDFAKPGTMCW-----AAGWGRTGLKKSISRTLREVELRIMGKKACKIFKHYKDSL---QICVGS 190

  Fly   217 WR--ADTCSGDSGGPLSRKMSNGRITRTVQLGIVSYGHYLCRGPGVYTYVPSFTNWI 271
            ..  |....|||||||        :...|..||||.|....:.|.::|.:.....||
Mouse   191 STKVASVYMGDSGGPL--------LCAGVAHGIVSSGRGNAKPPAIFTRISPHVPWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 75/252 (30%)
Cma2NP_001019885.1 Tryp_SPc 21..242 CDD:238113 75/252 (30%)

Return to query results.
Submit another query.