DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30082 and grass

DIOPT Version :9

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:277 Identity:91/277 - (32%)
Similarity:134/277 - (48%) Gaps:30/277 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KLRAQFIDPN--CGTTINLPPTNRIVGGRTADIGSNPWLAYLH----KNSSLVCTGTLITKRFVL 76
            |:.:.|.|.|  ||..:    :.|:..|....:.|.||:|.|.    ..|..:|.|.:|::|::|
  Fly    99 KVMSLFKDENFDCGNFL----SQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYIL 159

  Fly    77 TAAHCLHSFH--LLTVRLGEYDTSTRIDCTSE----FCIPTYEEYSVENAYIHTFFGGRQDSRND 135
            |||||:|...  |..:||||:..||..||..:    .|.|......:|...||..:..|. ..:|
  Fly   160 TAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARH-IMHD 223

  Fly   136 IGLLKLNGTVVYKLFIRPICL-----FRDPGQVPYSSTYEAAGWGKIDLINTATVLQTVNLIRLD 195
            |.|||||.:|.::..|:||||     .::..:  ..|||...|||..:..:::.||...|:....
  Fly   224 IALLKLNRSVPFQKHIKPICLPITDELKEKAE--QISTYFVTGWGTTENGSSSDVLLQANVPLQP 286

  Fly   196 QSDCERSLRTSLSYGQFCAGQW-RADTCSGDSGGPLS--RKMSNGRITRTVQLGIVSYGHYLCRG 257
            :|.|.::.|.::...|.|.|.. ..|:|.|||||||.  .:.......:.|:.||||.|...|..
  Fly   287 RSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQ 351

  Fly   258 ---PGVYTYVPSFTNWI 271
               ||:||.|..:..||
  Fly   352 ISLPGLYTNVGEYVQWI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 39..271 CDD:214473 83/252 (33%)
Tryp_SPc 40..274 CDD:238113 84/253 (33%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 84/251 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BQ4K
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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