DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30082 and CG7142

DIOPT Version :9

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_650703.1 Gene:CG7142 / 42194 FlyBaseID:FBgn0038595 Length:334 Species:Drosophila melanogaster


Alignment Length:270 Identity:73/270 - (27%)
Similarity:114/270 - (42%) Gaps:40/270 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TTINLPP----TNRIVGGRTADIGSNPWLAYLH---KNSSLV--CTGTLITKRFVLTAAHCLHSF 85
            :|:..|.    |.:.:..|.|...|.|::..:.   .:..||  |.||:|.:.::|||||||.|.
  Fly    66 STLEAPRQTHWTKKFLAKREATPHSAPYVVSIQMMTPDQGLVHYCAGTIINEHWILTAAHCLSSP 130

  Fly    86 HLL---TVRLGEYDTSTRIDCTSEFCIPTYEEYSVENAYIHTFFGGRQDSRNDIGLLKLNGTVVY 147
            ..:   .:..|.:|...:....|...:...:.|.....|:    ||  .:..||.|:.....:|:
  Fly   131 QAVENSVIVAGSHDIHDQKGEASNIQMRHIDYYVRHELYL----GG--VNPYDIALIYTKEPLVF 189

  Fly   148 KLFIRPICLFRDPGQVP-YSSTYEAAGWGKIDLI---NTATVLQTVNLIRLDQSDCERSL----- 203
            ..:::|..|.....|.. |.:.|   |||.:.:.   |....||..|:..||...||:.|     
  Fly   190 DTYVQPATLPEQDAQPEGYGTLY---GWGNVSMTAVPNYPHRLQEANMPILDMELCEQILARSGL 251

  Fly   204 ---RTSLSYGQFCAGQWRADTCSGDSGGPLSRKMSNGRITR-TVQLGIVSYGHYLC---RGPGVY 261
               .|:|..|....|   ...|:.||||||.::.......: .:.:||||:|...|   ..|.|:
  Fly   252 PLHETNLCTGPLTGG---VSICTADSGGPLIQQCCEEHFEQANIVIGIVSWGKMPCGQKNAPSVF 313

  Fly   262 TYVPSFTNWI 271
            ..|.:||.||
  Fly   314 VRVSAFTEWI 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 39..271 CDD:214473 68/255 (27%)
Tryp_SPc 40..274 CDD:238113 70/256 (27%)
CG7142NP_650703.1 Tryp_SPc 84..326 CDD:238113 70/252 (28%)
Tryp_SPc 84..323 CDD:214473 68/250 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24256
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.