DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30082 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:286 Identity:82/286 - (28%)
Similarity:126/286 - (44%) Gaps:41/286 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ASFAFLVCLTPKLRAQFIDPNCGTTINLPPTNRIVGGRTADIGSNPWLAYLHKNSSLVCTGTLIT 71
            :||.|.....| :....::..||.....|..:::.||:.|:.|..||.|.|.:|:...|..|||:
  Rat   168 SSFKFSDIAMP-IAEDLLNTCCGRRTITPGGHKVAGGQDAEEGEWPWQASLQQNNVHRCGATLIS 231

  Fly    72 KRFVLTAAHCL----------HSFHLLTVRLGEYDTSTRIDCTSEFCIPTYEEYSVENAYIHTFF 126
            ..:::|||||.          .||..|..:                   ...:.:|::..||..:
  Rat   232 NSWLITAAHCFVRSANPKDWKVSFGFLLSK-------------------PQAQRAVKSIVIHENY 277

  Fly   127 GGRQDSRNDIGLLKLNGTVVYKLFIRPICLFRDPGQVPYSSTYEAAGWGKIDLI-NTATVLQTVN 190
             ......|||.:::|:..|:|:..||..||.....:.|.:|.....|||.:... ::..:||...
  Rat   278 -SYPAHNNDIAVVRLSSPVLYENNIRRACLPEATQKFPPNSDVVVTGWGTLKSDGDSPNILQKGR 341

  Fly   191 LIRLDQSDCE--RSLRTSLSYGQFCAG--QWRADTCSGDSGGPLSRKMSNGRITRTVQLGIVSYG 251
            :..:|...|.  ::....::.|..|||  :.|.|.|.|||||||..:.|.|   .....||||:|
  Rat   342 VKIIDNKTCNSGKAYGGVITPGMLCAGFLEGRVDACQGDSGGPLVSEDSKG---IWFLAGIVSWG 403

  Fly   252 H--YLCRGPGVYTYVPSFTNWILSIT 275
            .  .|...|||||.|..:.:||.|.|
  Rat   404 DECALPNKPGVYTRVTHYRDWISSKT 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 73/250 (29%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 73/250 (29%)
Blue background indicates that the domain is not in the aligned region.

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