DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30082 and Jon66Cii

DIOPT Version :9

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster


Alignment Length:277 Identity:67/277 - (24%)
Similarity:99/277 - (35%) Gaps:84/277 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TINLPPTN------RIVGGRTADIGSNPWLAYLHKNSSLVCTGTLITKRFVLTAAHCLHSFHLLT 89
            |..|.|.:      ||..|..|:.|..|:...|..:....|.|::|...:||||.||:.....:|
  Fly    25 TEKLTPVHTKDMQGRITNGYPAEEGKAPYTVGLGFSGGWWCGGSIIAHDWVLTAEHCIGDADSVT 89

  Fly    90 VRLGEYDTSTRIDCTSEFCIPTYEEYSVENAYIHTFFGGR--QDSRNDIGLLKLNGT----VVYK 148
            |..|                   ..:.....:.|....|.  :.|..||.|:::...    :|.|
  Fly    90 VYFG-------------------ATWRTNAQFTHWVGNGNFIKHSSADIALIRIPHVDFWHMVNK 135

  Fly   149 LFIRPICLFRDPGQVP-YSSTYE--------AAGW-GKIDLINTATVLQTVNLIRLDQSDCERSL 203
            :            ::| |:..|.        |.|| |..|.......||.|:|..:..|:|    
  Fly   136 V------------ELPSYNDRYNDYNEWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSEC---- 184

  Fly   204 RTSLSYGQ-----FCA----GQWRADTCSGDSGGPLSRKMSNGRITR--TVQLGIVSYGHYL-CR 256
              |..||.     .|.    |:   .||.|||||||        :|.  |..:|:.::|... |:
  Fly   185 --SGYYGSVGDNILCVRTPDGK---STCGGDSGGPL--------VTHDGTKLVGVTNFGSVAGCQ 236

  Fly   257 --GPGVYTYVPSFTNWI 271
              .|..:..|....:||
  Fly   237 SGAPAGFQRVTYHLDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 39..271 CDD:214473 62/261 (24%)
Tryp_SPc 40..274 CDD:238113 63/262 (24%)
Jon66CiiNP_648217.1 Tryp_SPc 39..253 CDD:214473 62/261 (24%)
Tryp_SPc 40..256 CDD:238113 63/262 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435744
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
21.930

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