DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30082 and CG3700

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster


Alignment Length:269 Identity:90/269 - (33%)
Similarity:133/269 - (49%) Gaps:43/269 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGGRTADIGSNPWLAYL-----HKNSSLV---CTGTLITKRFVLTAAHCLHSFH---------- 86
            ||||..|.....|::|.:     :|:.|.:   |.|:::..:|||||||||.:..          
  Fly   102 IVGGTKASGKEFPFMALIGTHRPNKSKSDINWDCGGSVVHPKFVLTAAHCLETDESKAERLDPNF 166

  Fly    87 ---LLTVRLGEYDTSTRIDCTSEFCIPTYEEYSVENAYIHTFF---GGRQDSRNDIGLLKLNGTV 145
               ...|||||.|.::..|..      ..:::.|.|..:|..:   ...|..:|||.|::|:...
  Fly   167 DSPKFVVRLGELDYNSTTDDA------LVQDFRVVNYVVHPGYDTEDEEQGFKNDIALVELDRKA 225

  Fly   146 VYKLFIRPICLFRDPGQVPYSSTYEAAGWG-KIDLINTATVLQTVNLIRLDQSDCERSLRTSL-S 208
            .:...:..:||..|.|......|  ||||| ..|.:.::.:|: |||.|.....|::.||.|: :
  Fly   226 EFNDHVAAVCLPPDSGNDVQQVT--AAGWGFTADGVKSSHLLK-VNLQRFSDEVCQKRLRFSIDT 287

  Fly   209 YGQFCAGQW--RADTCSGDSGGPLSRKMSNGRITRTVQLGIVSYGHYLCRG---PGVYTYVPSFT 268
            ..|||||..  :||||:||||||:..:.......:.| :|||||| .:|..   |.|||.|..:|
  Fly   288 RTQFCAGSMSSQADTCNGDSGGPIFVQHPLYPCLKQV-IGIVSYG-LVCGSQGLPSVYTKVHLYT 350

  Fly   269 NWILSITRW 277
            :||.||. |
  Fly   351 DWIESIV-W 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 87/264 (33%)
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 87/264 (33%)

Return to query results.
Submit another query.