DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30082 and ela2l

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_956180.1 Gene:ela2l / 334304 ZFINID:ZDB-GENE-040511-1 Length:267 Species:Danio rerio


Alignment Length:271 Identity:87/271 - (32%)
Similarity:124/271 - (45%) Gaps:52/271 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NCGTTINLPPTNRIVGGRTADIGSNPW---LAYLHKNSS---LVCTGTLITKRFVLTAAHCLHSF 85
            :||.....|...|:|||  .|:..|.|   ::..:|:.|   ..|.|:||.|::|||||||:.|.
Zfish    16 SCGLPTFPPIVTRVVGG--VDVRPNSWPWQISLQYKSGSNWYHTCGGSLIDKQWVLTAAHCISSS 78

  Fly    86 HLLTVRLGEYDTSTRIDCTSEFCIPTYEEYSVE----NAYIHTFFGGRQDSRNDIGLLKLNGTVV 146
            ....|.||::..|..            |..||.    ...:|..:.. ...||||.|:||...|.
Zfish    79 RTYRVFLGKHSLSQE------------ENGSVAIGAGKIIVHEAWNS-FTIRNDIALIKLETAVT 130

  Fly   147 YKLFIRPICLFRDPGQVPYSSTYEAAGWGKIDLIN--TATVLQTVNLIRLDQSDCERS------L 203
            ....|.|.||......:|:::.....|||:: ..|  .|.:||...|..:|.:.|.:|      :
Zfish   131 IGDTITPACLPEAGYVLPHNAPCYVTGWGRL-YTNGPLADILQQALLPVVDHATCSKSDWWGSQV 194

  Fly   204 RTSLSYGQFCAGQWRAD----TCSGDSGGPLSRKMSNGRITRTVQLGIVSYGHYL-C---RGPGV 260
            .||:    .|||   .|    .|.|||||||:...|:|  ...|. ||||:|..| |   :.|.|
Zfish   195 TTSM----VCAG---GDGVVAGCDGDSGGPLNCAGSDG--AWEVH-GIVSFGSGLSCNYNKKPTV 249

  Fly   261 YTYVPSFTNWI 271
            :|.|.::::||
Zfish   250 FTRVSAYSDWI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 83/258 (32%)
ela2lNP_956180.1 Tryp_SPc 29..263 CDD:238113 83/258 (32%)

Return to query results.
Submit another query.