DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30082 and Tmprss11g

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001008554.1 Gene:Tmprss11g / 289546 RGDID:1306446 Length:417 Species:Rattus norvegicus


Alignment Length:280 Identity:85/280 - (30%)
Similarity:124/280 - (44%) Gaps:41/280 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PKLR----AQ---FIDPNCGTTINLPPTNRIVGGRTADIGSNPWLAYLHKNSSLVCTGTLITKRF 74
            |.||    ||   .::.|||..:..|...||..|:.|...|.||.:.|......:|..:||..::
  Rat   156 PYLREMNAAQAEHILNSNCGLGMEYPRIARIADGKPAGSNSWPWQSSLQVEGIHLCGASLIGSQW 220

  Fly    75 VLTAAHCLHSF---HLLTVRLGE---YDTSTRIDCTSEFCIPTYEEYSVENAYIHTFFGGRQDSR 133
            ::|:|||..::   .|.||..|.   ...:||               .||:..||..:...:.. 
  Rat   221 LVTSAHCFDNYKNPKLWTVSFGRTLGNPLTTR---------------KVESIIIHENYAAHKHD- 269

  Fly   134 NDIGLLKLNGTVVYKLFIRPICLFRDPGQVPYSSTYEAAGWGKIDLINT-ATVLQTVNLIRLDQS 197
            :||.::||:..|::...:|.:||.....||...|.....|||.:..... ...||.|.:..:...
  Rat   270 DDIAVVKLSSPVLFSENLRTVCLPEATFQVLPKSKVFVTGWGALKANGPFPNSLQEVEIEIISND 334

  Fly   198 DCER--SLRTSLSYGQFCAG--QWRADTCSGDSGGPLSRKMSNGRITRTVQLGIVSYGHYLC--- 255
            .|.:  ....::|.|..|||  ..:.|.|.|||||||  .:|:.| .:...|||||:| ..|   
  Rat   335 VCNQVNVYGGAISSGMICAGFLTGKLDACEGDSGGPL--VISDNR-NKWYLLGIVSWG-IDCGKE 395

  Fly   256 RGPGVYTYVPSFTNWILSIT 275
            ..||:||.|..:.|||.|.|
  Rat   396 NKPGIYTRVTHYRNWIKSKT 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 73/247 (30%)
Tmprss11gNP_001008554.1 SEA 48..146 CDD:460188
Tryp_SPc 185..411 CDD:214473 72/245 (29%)
Blue background indicates that the domain is not in the aligned region.

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