DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30082 and Cma1

DIOPT Version :9

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_037224.1 Gene:Cma1 / 25627 RGDID:2365 Length:247 Species:Rattus norvegicus


Alignment Length:248 Identity:75/248 - (30%)
Similarity:112/248 - (45%) Gaps:35/248 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGGRTADIGSNPWLAYLH----KNSSLVCTGTLITKRFVLTAAHCLHSFHLLTVRLGEYDTSTR 100
            |:||......|.|::|||.    .|....|:|.||.:.||||||||  :...:||.||.::.:.:
  Rat    22 IIGGTECIPHSRPYMAYLEIVTSDNYLSACSGFLIRRNFVLTAAHC--AGRSITVLLGAHNKTYK 84

  Fly   101 IDCTSEFCIPTYEEYSVENAYIHTFFGGRQDSR---NDIGLLKLNGTVVYKLFIRPICLFRDPGQ 162
            .|        |:::..||..:||..:    |.|   :||.||||.......|.:..:.|..:...
  Rat    85 ED--------TWQKLEVEKQFIHPNY----DKRLVLHDIMLLKLKEKAKLTLGVGTLPLSANFNF 137

  Fly   163 VPYSSTYEAAGWGKIDLINTAT-VLQTVNLIRLDQSDCERSLRTSLSY-GQFCAGQWR--ADTCS 223
            :|......|.|||:.::...|: .||.|.:...:...|:..  ||..: .|.|.|..:  .:...
  Rat   138 IPPGRMCRAVGWGRTNVNEPASDTLQEVKMRLQEPQSCKHF--TSFQHKSQLCVGNPKKMQNVYK 200

  Fly   224 GDSGGPLSRKMSNGRITRTVQLGIVSYGHYLCRGPGVYTYVPSFTNWILSITR 276
            |||||||        :...:..||.||.|...:.|.|:|.:..:..||..|.|
  Rat   201 GDSGGPL--------LCAGIAQGIASYVHPNAKPPAVFTRISHYRPWINKILR 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 39..271 CDD:214473 71/241 (29%)
Tryp_SPc 40..274 CDD:238113 73/244 (30%)
Cma1NP_037224.1 Tryp_SPc 21..240 CDD:214473 71/241 (29%)
Tryp_SPc 22..243 CDD:238113 73/244 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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