DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30082 and Tmprss2

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:268 Identity:81/268 - (30%)
Similarity:117/268 - (43%) Gaps:52/268 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CGTTINLPPTNRIVGGRTADIGSNPWLAYLHKNSSLVCTGTLITKRFVLTAAHC----LHSFHLL 88
            ||.. ::...:|||||.||..|..||...||.....||.|::||..:::|||||    |.|....
  Rat   243 CGVR-SVRRQSRIVGGSTASPGDWPWQVSLHVQGIHVCGGSIITPEWIVTAAHCVEEPLSSPRYW 306

  Fly    89 TVRLGEYDTSTRIDCTSEFCIPTY-EEYSVENAYIHTFFGGRQDSRNDIGLLKLNGTVVYKLFIR 152
            |...|....|          :..| ..:.||....|..:..: ...|||.|:||...:.:...::
  Rat   307 TAFAGILKQS----------LMFYGSRHQVEKVISHPNYDSK-TKNNDIALMKLQTPLAFNDVVK 360

  Fly   153 PICLFRDPGQV----------PYSSTYEAAGWGKI-DLINTATVLQTVNLIRLDQSDCERSLRTS 206
            |:|| .:||.:          .:.:|||.   ||. |::|.|    .|.||...:.:.:......
  Rat   361 PVCL-PNPGMMLDLAQECWISGWGATYEK---GKTSDVLNAA----MVPLIEPSKCNSKYIYNNL 417

  Fly   207 LSYGQFCAG--QWRADTCSGDSGGPLSRKMSNGRITRTVQ----LGIVSYGHYLCRG--PGVYTY 263
            ::....|||  |...|:|.|||||||        :|...:    :|..|:|....:.  ||||..
  Rat   418 ITPAMICAGFLQGSVDSCQGDSGGPL--------VTLKNEIWWLIGDTSWGSGCAKAYRPGVYGN 474

  Fly   264 VPSFTNWI 271
            |..||:||
  Rat   475 VTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 78/256 (30%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 2/4 (50%)
Tryp_SPc 254..485 CDD:238113 78/256 (30%)
Blue background indicates that the domain is not in the aligned region.

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