DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30082 and klkb1

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_002934450.3 Gene:klkb1 / 100486524 XenbaseID:XB-GENE-985051 Length:629 Species:Xenopus tropicalis


Alignment Length:293 Identity:87/293 - (29%)
Similarity:131/293 - (44%) Gaps:51/293 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IASFAFLVCLTPKLRAQFIDPNCGTTINLPPTNRIVGGRTADIGSNPWLAYLHKNSSL-----VC 65
            |:.|:..:|....::      .||..|.  ..||||||..:.:|..||...:|...:.     .|
 Frog   365 ISGFSLRLCKIKSVK------GCGEPIE--HANRIVGGTDSVLGEWPWQVSMHLRLTASYKKHAC 421

  Fly    66 TGTLITKRFVLTAAHCLHSFHLL---------TVRLGEYDTSTRIDCTSEFCIPTYEEYSVENAY 121
            .|::|:.::::|||||. :.|.|         .|:|.....||....|             |...
 Frog   422 GGSIISNQWIVTAAHCF-AMHPLPQMWIIYSGVVKLSNITQSTPFSET-------------EQII 472

  Fly   122 IHTFFGGRQDSRNDIGLLKLNGTVVYKLFIRPICL-FRDPGQVPYSSTYEAAGWGKIDLINT-AT 184
            ||..:.|..:. .||.||||...:.:....:.||| .|:|..|..:|.: ..|||..:...: |.
 Frog   473 IHPHYTGAGNG-TDIALLKLKTPISFNDHQKAICLPPREPTFVLPNSCW-ITGWGFTEESGSLAN 535

  Fly   185 VLQTVNLIRLDQSDCERSL-RTSLSYGQFCAGQWRA--DTCSGDSGGPLSRKMSN-GRITRTVQL 245
            :||...:.::...:|:.:. :|.:.....|||..|.  |:|.|||||||:..:.. ..:|     
 Frog   536 ILQKAEVPQISTEECQGNYEQTRIDKKILCAGYKRGKIDSCKGDSGGPLACVVDEIWYLT----- 595

  Fly   246 GIVSYGHYLCR--GPGVYTYVPSFTNWILSITR 276
            ||.|:|....|  .|||||.|..||:||:..||
 Frog   596 GITSWGEGCARPGKPGVYTRVSEFTDWIIEHTR 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 77/255 (30%)
klkb1XP_002934450.3 APPLE 21..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 290..373 CDD:128519 2/7 (29%)
Tryp_SPc 391..626 CDD:238113 77/255 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.