DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir51b and Ir10a

DIOPT Version :9

Sequence 1:NP_725440.1 Gene:Ir51b / 246442 FlyBaseID:FBgn0050081 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster


Alignment Length:672 Identity:129/672 - (19%)
Similarity:250/672 - (37%) Gaps:165/672 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VILLLALTNAAYNVTLLKSVLSLISTRE-PWINTPIFVGHNTQGGDLNDLIIW-LHQT---MGVT 69
            |.||..|.....|:|.|..:| :..||: |.:...:..|.:.|..: |..:.| |.:|   :.:.
  Fly     7 VFLLFMLDLKTLNLTRLNGLL-VEPTRDLPQLELWLRAGSDHQDAE-NPYVQWFLLRTEIPLSIV 69

  Fly    70 SLTMNLFLQPEHIRPLGHFKITRYNGIALFFCHDKHDIMWLTLDRNLRK-------LRRIRLIII 127
            :...|.:...:   |.|.                ::.::.::||:.|..       .:......|
  Fly    70 TYQENRYWMDD---PFGR----------------RNLVLVMSLDQLLTNRGAAAPIQKASTFFYI 115

  Fly   128 LRNQ----RSGSQGAIKSIFNALW-QYQFLNVLVLQRDQLYSYTPYP--------AMRFFKLDIH 179
            |.:|    .:..|..::.....|| |::..|...|.||.::.|.|:.        .:|::..:..
  Fly   116 LADQDKDLSADEQLRLEGSCRQLWTQHKVYNRFFLTRDGVWIYDPFKRRDSAFGRLVRYYGSETL 180

  Fly   180 TEPLFPHAARNFHGYVVSTPAENDIPRVFHVHDPLTKSRKVLGYAYRTFVEYL------DHYNAS 238
            .:.||    |:..||    |....:.|..:......|...:|...  |.|::|      :..|.:
  Fly   181 DKLLF----RDMAGY----PLRIQMFRSVYTRPEFDKETGLLTRV--TGVDFLVAQMLRERLNFT 235

  Fly   239 LRLTNPDENLDPTTSVNMNH---IVQLIIDGQLEISLHPYVFTPPTATKSY---PLLIYPN--CL 295
            :.|..|::......|.|.::   |..:|.|| |:|.|..: |......:.|   .:.:|.:  |:
  Fly   236 MLLQQPEKKYFGERSANGSYNGAIGSIIKDG-LDICLTGF-FVKDYLVQQYMDFTVAVYDDELCI 298

  Fly   296 IVPMRNEIPRHMYLLRPFQLYSWYILLFAVFYITGILYCISPKLNKSSWPQRLGLNFLDAISKIL 360
            .||..:.||:.:            :.:|||.|...:.:.::.......|   |.|..::...:|:
  Fly   299 YVPKASRIPQSI------------LPIFAVGYDIWLGFVLTAFACALIW---LTLRVINLKLRIV 348

  Fly   361 ------FISPPITIYRPTWRHLIIFLQLSVLGFMSTSW---------------YNIELDSFFTTI 404
                  .:...:.|...||   :::::|: |..:..|:               :....:|...|:
  Fly   349 SLGNQHIVGQALGIMVDTW---VVWVRLN-LSHLPASYAERMFIGTLCLVSVIFGAIFESSLATV 409

  Fly   405 VVG----EQVNSMDQLVHQQQRVLVKEYEINTFLRHVEPRLVEKVSRLLVPVNASEQVSALLSFN 465
            .:.    :.:|:|.:|.....:|:.|      :....:.....:.|.|...:|..      ||:|
  Fly   410 YIHPLYYKDINTMQELDESGLKVVYK------YSSMADDLFFSETSPLFASLNKK------LSWN 462

  Fly   466 RSFAYPFTEERWQFFAMQQQYAFKPIFRFSSACLGSPH------------------IGYPMRVDS 512
            |.......:|..:|    :..|  .:.|::|..|.|.|                  |.|.|..||
  Fly   463 RDLRADVIDEVARF----RNKA--GVSRYTSLILESSHFTLLRKIWVVPECPKYYTISYVMPRDS 521

  Fly   513 HLETSLNHFILKIQDTGLLNHWVVSDFNDAMRAGYVRFVDNVLGYQS-------IDVDTLRLGWC 570
            ..|.::|..:|:..:.||:..|:    .|......::...|:|...:       :.:..|:|.:.
  Fly   522 PWEDAVNALLLRFLNAGLIVKWI----QDEKSWVDIKMRSNILEADAESELVRVLTIGDLQLAFY 582

  Fly   571 VLGIGWILSALVFSCEY--WHL 590
            |:..|.:|:.|.|..|:  |.|
  Fly   583 VVIGGNLLAFLGFLAEHFRWKL 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir51bNP_725440.1 None
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 17/75 (23%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 15/102 (15%)
Lig_chan 319..587 CDD:278489 49/296 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.