DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30075 and shu

DIOPT Version :10

Sequence 1:NP_725390.1 Gene:CG30075 / 246437 FlyBaseID:FBgn0050075 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster


Alignment Length:169 Identity:63/169 - (37%)
Similarity:103/169 - (60%) Gaps:9/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DQSLSSD---------EQDDIFFLIYRKAHTLFQAGKLWMRRMRYHDAQRAFEKAITRLKTCKTS 84
            |.||..|         |..|.|.::|.||..|...||..::..||..|..|||:|::.|..|:.:
  Fly   190 DYSLIGDAKGIDAIPQEDRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFERAVSSLNYCRMA 254

  Fly    85 SFEQQCRKKDMLIALFESLMICFNKMRQSRCVCYVMKELRLLTINNPSALALCQHGRALSDLGKY 149
            :.|::.::.::|..|.::|||.:|||.:.:..|.:||.||.||:.|||..||.|.||||:.||:|
  Fly   255 NDEEERKQTELLTTLNQNLMIVYNKMNKPKRACIMMKALRHLTMGNPSCKALFQEGRALAALGEY 319

  Fly   150 HPSRLCYIKALKKRPRDQGIKDKITRISKRITELEDTNQ 188
            :.:|..|::|..|:|.::.|.|:|..::|||::.|:.::
  Fly   320 NLARNAYLQAQAKQPANKEISDEIISMNKRISKYEEASR 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30075NP_725390.1 None
shuNP_611837.1 FKBP_C 96..189 CDD:459735
TPR repeat 218..257 CDD:276809 13/38 (34%)
TPR 230..>389 CDD:440225 50/129 (39%)
TPR repeat 262..295 CDD:276809 12/32 (38%)
TPR repeat 304..329 CDD:276809 12/24 (50%)
Blue background indicates that the domain is not in the aligned region.

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