DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp50b and Obp50d

DIOPT Version :9

Sequence 1:NP_725386.1 Gene:Obp50b / 246435 FlyBaseID:FBgn0050073 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_725388.2 Gene:Obp50d / 246436 FlyBaseID:FBgn0050074 Length:173 Species:Drosophila melanogaster


Alignment Length:188 Identity:37/188 - (19%)
Similarity:74/188 - (39%) Gaps:21/188 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLHLLGFLWLPLLVYSVSNDMGGLQKCTELLNTHKLVYCCGKSFLDKFPFVGSNCTPFWDD---Y 65
            :||.|.::.:.:..:..::.:     |::..:...|..||....|| |....|.|:.:..:   .
  Fly     1 MLHKLTWVLIFIPAFRAADPI-----CSQRPDVTALRNCCKLPNLD-FSSFNSKCSQYLVNGVHI 59

  Fly    66 GPCRYECLYRHWDLLDQDNKIKKPELYLMITSLYSPLNGYDKYGAAFKAAHETCEALGSRHADFL 130
            .||.:||::|..:.|:..:.:.:....:|.|.|     |.|::...:.....:|   |::....:
  Fly    60 SPCSFECIFRAANALNGTHLVMENIEKMMKTIL-----GSDEFVHVYLDGFRSC---GNQEKVLI 116

  Fly   131 LLYSNQVADKMGMASSTCLPYAMLHAQCTMVYLTANCPRENWIDDPKCNSLQKLLSSC 188
            .....:.....|...|..:.|.:    |...|:..|||...|.....||..::....|
  Fly   117 KAMKRRRVPITGKCGSMAIMYGL----CAHRYVYRNCPESVWSKSATCNEAREYSIRC 170



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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