DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp50b and Obp50c

DIOPT Version :9

Sequence 1:NP_725386.1 Gene:Obp50b / 246435 FlyBaseID:FBgn0050073 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_725387.3 Gene:Obp50c / 246434 FlyBaseID:FBgn0050072 Length:185 Species:Drosophila melanogaster


Alignment Length:187 Identity:36/187 - (19%)
Similarity:60/187 - (32%) Gaps:61/187 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CTELLNTHKLVYCC---------GKSFLDKFPFVGSNCTPFWDDYGPCRYECLYRHWDLLDQDNK 85
            ||...:.:.:..||         .||...|:..||:      ....||.|||::...:.: .|..
  Fly    25 CTRRQDFNIVKDCCVYPTFRFDQFKSQCGKYMPVGA------PRISPCLYECIFNKTNTV-VDGA 82

  Fly    86 IKKPELYLMITSLYSPLNGYDKYGAAFKAAHETCEALGSRHADFLLLYSNQVADKMGMASST--- 147
            |......||:..|:.                         :.||...|.|.:   ||.:.|.   
  Fly    83 IHPDNARLMLEKLFG-------------------------NQDFEEAYFNGL---MGCSDSVQEM 119

  Fly   148 --------------CLPYAMLHAQCTMVYLTANCPRENWIDDPKCNSLQKLLSSCTK 190
                          |.|:::.:..|...|:..:||..:|.....|...:....:|:|
  Fly   120 ISNRRSRPQRKTEQCSPFSLFYGICAQRYVFNHCPSSSWSGTESCEMARLQNMNCSK 176



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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