DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp50c and Obp50e

DIOPT Version :9

Sequence 1:NP_725387.3 Gene:Obp50c / 246434 FlyBaseID:FBgn0050072 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_610959.2 Gene:Obp50e / 36600 FlyBaseID:FBgn0033931 Length:196 Species:Drosophila melanogaster


Alignment Length:188 Identity:44/188 - (23%)
Similarity:73/188 - (38%) Gaps:26/188 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LIC--SLLAMAGCDPIDVDCTRRQDFN--IVKDCCVYPTFRFDQFKSQCGKYMP--VGAPRISP- 65
            :||  .||.:..|.....:|:...:||  .:..||..|.........:|.||:.  ..|....| 
  Fly     5 IICFGFLLIILECSLASFNCSAPPNFNNFDINTCCRTPELDMGDVPQKCHKYVSGLKSANSKYPS 69

  Fly    66 ----CLYECIFNKTNTVVDGAIHPDNARLMLEKLFGNQDFE---------EAYFNGLMGCSDSVQ 117
                |..:||:.:|..:|:|.|..:..:..||:....:|.|         |:..:.:.|...|:.
  Fly    70 YAHLCYPDCIYRETGAMVNGKIKVNRVKQYLEEHVHRRDQEIVSHIVQSFESCLSNVKGHMKSLN 134

  Fly   118 EMISNRRSRPQRKTEQCSPFSLFYGICAQRYVFNHCPSSSWSGTESCEMARLQNMNCS 175
              |.:.:..|    ..||||:.....|.....|.:||...|...:.|.:|:.....|:
  Fly   135 --IESYKVLP----HGCSPFAGIIYSCVNAETFLNCPQQMWKNEKPCNLAKQFAEQCN 186



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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