DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp50c and Obp49a

DIOPT Version :9

Sequence 1:NP_725387.3 Gene:Obp50c / 246434 FlyBaseID:FBgn0050072 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_610812.1 Gene:Obp49a / 36399 FlyBaseID:FBgn0050052 Length:212 Species:Drosophila melanogaster


Alignment Length:186 Identity:48/186 - (25%)
Similarity:72/186 - (38%) Gaps:31/186 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DVDCTRRQDFNIVKDCCVYPTFRFDQFKSQCGKY------MPVGA-------------PRISPCL 67
            ||||::|..|...|.||..|.|...:.|.:|.|:      .|.|.             |...||.
  Fly    23 DVDCSKRPSFVNPKTCCPMPDFVTAELKQKCIKFDMTPPPPPDGEASGSFESKRRHHHPHPPPCF 87

  Fly    68 YECIFNKTNTVVDGAIHPDNARL--MLEKLF-GNQDFEEAYFNGLMGCSDSVQEMISNRRSRPQR 129
            :.||||:|....:..:  |.|:|  .|:::| .:.|.:.........|:..|.:..:|...||..
  Fly    88 FSCIFNETGIYQNRKL--DEAKLNAYLQEVFEDSSDLQTTATQAFTTCATKVADFEANLPPRPAP 150

  Fly   130 KTEQCSPF-----SLFYGICAQRYVFNHCPSSSWSGTESCEMARLQNMNCSKPSRG 180
            ......|.     ....| |..|.:..:||.|..:.::.|...:.....| ||.||
  Fly   151 SPPPGFPMCPHDAGHLMG-CVFRNMMKNCPDSIRNDSQQCTDMKEFFTKC-KPPRG 204



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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