DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp50c and Obp50a

DIOPT Version :9

Sequence 1:NP_725387.3 Gene:Obp50c / 246434 FlyBaseID:FBgn0050072 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_995832.1 Gene:Obp50a / 246432 FlyBaseID:FBgn0050067 Length:200 Species:Drosophila melanogaster


Alignment Length:161 Identity:42/161 - (26%)
Similarity:63/161 - (39%) Gaps:24/161 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 CCVYPTFRFDQFKSQCGK---YMPVGAPRIS-----------PCLYECIFNKTNTVVDGAIHPDN 87
            ||..|...:..|..:|.|   ...|...|||           .|..:|.||.::.:....:....
  Fly    37 CCSAPLPNWGVFNRECHKSAIQASVSINRISKSKVNLANFLIKCRLDCDFNASSVLQGNRLIQAK 101

  Fly    88 ARLMLEKLFGNQDFEEAYFNGLMGCSDSV----QEMISNRRSRPQRKTEQCSPFSLFYGICAQRY 148
            .|.|||:.|.|:...:||.:....||..|    ||:     |...|:::.|...:|||.:||...
  Fly   102 VRPMLERAFSNEPTIDAYESNFAKCSTVVRSKYQEL-----SPLSRQSDACDRHALFYSLCAYAR 161

  Fly   149 VFNHCPSSSWS-GTESCEMARLQNMNCSKPS 178
            :...||...|. ....|:.|:.....|..|:
  Fly   162 LIFTCPDKMWQRNNRMCQEAKAYAKKCPWPA 192



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 48 1.000 Inparanoid score I7675
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.060

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