DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp50a and Obp49a

DIOPT Version :9

Sequence 1:NP_995832.1 Gene:Obp50a / 246432 FlyBaseID:FBgn0050067 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_610812.1 Gene:Obp49a / 36399 FlyBaseID:FBgn0050052 Length:212 Species:Drosophila melanogaster


Alignment Length:184 Identity:43/184 - (23%)
Similarity:73/184 - (39%) Gaps:23/184 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 CRAAPKSVQNVHVCCSAPLPNW--GVFNRECHKSAI--------QASVSINRISKSKVNLANFLI 78
            |...|..| |...||  |:|::  ....::|.|..:        :||.|..  ||.:.:..: ..
  Fly    26 CSKRPSFV-NPKTCC--PMPDFVTAELKQKCIKFDMTPPPPPDGEASGSFE--SKRRHHHPH-PP 84

  Fly    79 KCRLDCDFNASSVLQGNRLIQAKVRPMLERAFSNEPTIDAYESN-FAKCSTVVRSKYQELSPLSR 142
            .|...|.||.:.:.|..:|.:||:...|:..|.:...:....:. |..|:|.|......|.|...
  Fly    85 PCFFSCIFNETGIYQNRKLDEAKLNAYLQEVFEDSSDLQTTATQAFTTCATKVADFEANLPPRPA 149

  Fly   143 QS-----DACDRHALFYSLCAYARLIFTCPDKMWQRNNRMCQEAKAYAKKCPWP 191
            .|     ..|...|.....|.:..::..|||.: :.:::.|.:.|.:..||..|
  Fly   150 PSPPPGFPMCPHDAGHLMGCVFRNMMKNCPDSI-RNDSQQCTDMKEFFTKCKPP 202



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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