DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30062 and LysD

DIOPT Version :9

Sequence 1:NP_725299.2 Gene:CG30062 / 246428 FlyBaseID:FBgn0050062 Length:171 Species:Drosophila melanogaster
Sequence 2:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster


Alignment Length:129 Identity:61/129 - (47%)
Similarity:87/129 - (67%) Gaps:3/129 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PLLAIRLQPCELAGQLYILDVPKSELPLWLCIAEFESRFNTHVVGQANADGSRDYGLFQISDRYW 87
            |.....:..|.||.::..|.||:.:|..|.||||.||.:.|.|||..|.:||.|||:|||:|.||
  Fly    15 PAFGRTMDRCSLAREMSNLGVPRDQLARWACIAEHESSYRTGVVGPENYNGSNDYGIFQINDYYW 79

  Fly    88 CAPPNRTEYYAFNDCNVNCTHLLSDDITMAVQCARLIQKQQGWTAWSVYPEFCNGTLDAIDVCF 151
            ||||:..  :::|:|.::|..||:||||.:|:||:.:..||||:|||.: .:|:|.|.:||.||
  Fly    80 CAPPSGR--FSYNECGLSCNALLTDDITHSVRCAQKVLSQQGWSAWSTW-HYCSGWLPSIDDCF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30062NP_725299.2 lysozyme_like 32..150 CDD:294153 58/117 (50%)
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 58/122 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468994
Domainoid 1 1.000 111 1.000 Domainoid score I12139
eggNOG 1 0.900 - - E1_2BPI7
Homologene 1 1.000 - - H80675
Inparanoid 1 1.050 130 1.000 Inparanoid score I7030
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D116778at33392
OrthoFinder 1 1.000 - - FOG0004526
OrthoInspector 1 1.000 - - mtm8677
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X173
1110.900

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