DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30060 and pebp1.2

DIOPT Version :9

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001016825.1 Gene:pebp1.2 / 549579 XenbaseID:XB-GENE-973798 Length:186 Species:Xenopus tropicalis


Alignment Length:146 Identity:43/146 - (29%)
Similarity:65/146 - (44%) Gaps:16/146 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VLYPCDIDIKPGIMVVINETLKQPIIRFKA-DPEHYHTLMMVDLDVPPDNN---TEWLIWMVGNI 98
            ||.|..:..:|.            .|.::. |....:||::.|.|.|...|   .||..::|.|:
 Frog    40 VLTPTQVQSRPS------------SIEWEGMDSSKLYTLVLTDPDAPSRKNPKFREWHHFLVVNM 92

  Fly    99 PGCDVAMGQTLVAYDNRRTIHGSNIHRIVFLAFKQYLELDFDETFVPEGEEKGRGTFNCHNFARK 163
            .|.::..|..|..|.......|:.:||.|:|.::|..||...|..:.....:.||.|...:|.:|
 Frog    93 KGNNINSGCVLSDYVGSGPPKGTGLHRYVWLVYEQTEELKCTERVLCNRSGEHRGMFKVASFRQK 157

  Fly   164 YALGNPMAANFYLVEW 179
            |.||.|:|.|.|..||
 Frog   158 YKLGTPVAGNCYQAEW 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 41/142 (29%)
pebp1.2NP_001016825.1 PEBP_euk 24..171 CDD:176644 41/142 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1557122at2759
OrthoFinder 1 1.000 - - FOG0000438
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11362
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X275
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.