DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30060 and PEBP1

DIOPT Version :10

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_002558.1 Gene:PEBP1 / 5037 HGNCID:8630 Length:187 Species:Homo sapiens


Alignment Length:115 Identity:36/115 - (31%)
Similarity:54/115 - (46%) Gaps:3/115 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 DPEHYHTLMMVDLDVPPDNN---TEWLIWMVGNIPGCDVAMGQTLVAYDNRRTIHGSNIHRIVFL 129
            |....:||::.|.|.|...:   .||..::|.|:.|.|::.|..|..|.......|:.:||.|:|
Human    59 DSGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWL 123

  Fly   130 AFKQYLELDFDETFVPEGEEKGRGTFNCHNFARKYALGNPMAANFYLVEW 179
            .::|...|..||..:.......||.|...:|.:||.|..|:|...|..||
Human   124 VYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQAEW 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 34/111 (31%)
PEBP1NP_002558.1 PEBP_euk 23..171 CDD:176644 34/111 (31%)
Interaction with RAF1. /evidence=ECO:0000269|PubMed:18294816 93..134 12/40 (30%)

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