DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30060 and ATP8B

DIOPT Version :9

Sequence 1:NP_725293.1 Gene:CG30060 / 246426 FlyBaseID:FBgn0265272 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_731669.2 Gene:ATP8B / 41469 FlyBaseID:FBgn0037989 Length:1726 Species:Drosophila melanogaster


Alignment Length:150 Identity:27/150 - (18%)
Similarity:50/150 - (33%) Gaps:33/150 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 HVIPRLFACKPTKVISVLYPCDIDIKPGIMVVINETLKQPIIRF------KADPEHYHTLMMVDL 80
            |:||:.:......||.:|......|....:|.|:..:...:|||      ..|.|.|:       
  Fly   495 HIIPKDYIPTGATVIGLLVFFSYAIVLNTVVPISLYVSVEVIRFVQSFLINWDEEMYY------- 552

  Fly    81 DVPPDNNTEWLIWMVGNIPGCDVAMGQTLVAYD-------------NRRTIHGSNIHRIVFLAFK 132
               |..||    :........:..:||....:.             |:.:|:|.:...::.|...
  Fly   553 ---PTTNT----YAKARTTTLNEELGQIQYIFSDKTGTLTQNIMTFNKCSINGRSYGDVIDLRTG 610

  Fly   133 QYLELDFDETFVPEGEEKGR 152
            :.:|:...:|.........|
  Fly   611 ELVEITEQQTIFQNSNTNNR 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30060NP_725293.1 PEBP_euk 34..177 CDD:176644 23/137 (17%)
ATP8BNP_731669.2 PhoLip_ATPase_N 195..260 CDD:292826
Cation_ATPase 891..985 CDD:289987
HAD_like <1261..1324 CDD:304363
PhoLip_ATPase_C 1324..1571 CDD:292829
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0206
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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